dcanr - Differential co-expression/association network analysis
This package implements methods and an evaluation framework to infer differential co-expression/association networks. Various methods are implemented and can be evaluated using simulated datasets. Inference of differential co-expression networks can allow identification of networks that are altered between two conditions (e.g., health and disease).
Last updated 4 months ago
networkinferencegraphandnetworkdifferentialexpressionnetwork
6 stars 1.85 score 27 dependencies 1 dependentsvissE - Visualising Set Enrichment Analysis Results
This package enables the interpretation and analysis of results from a gene set enrichment analysis using network-based and text-mining approaches. Most enrichment analyses result in large lists of significant gene sets that are difficult to interpret. Tools in this package help build a similarity-based network of significant gene sets from a gene set enrichment analysis that can then be investigated for their biological function using text-mining approaches.
Last updated 4 months ago
softwaregeneexpressiongenesetenrichmentnetworkenrichmentnetwork
12 stars 1.58 score 133 dependencies